JOB CONTROL FILE FOR PROGRAM MTG (edit only within the curly brackets) : Bayes Posterior by Metropolis-within-Gibbs Random Walk, Normal Perturbation : JOB ID:{ Retrospective PVA analysis for PVAX07. Inference on mean and std } : :{ of normally distributed exponential rate of increase where } : :{ censuses are subject to observation error and possible gaps, but } : :{ assuming no demographic stochasticity. } : :{ } : NAME JOB (must match name of job file; will name output files) : Job Name:{rpvax07a} : JOB SPECIFIC SUBROUTINE FILE (must match string from subroutine MTGIN) : Code Name:{ rpvax07} (named file of type F must be present in directory) : MONTE CARLO CONTROL : Seed: { 537 } (positive integer) : Retained samples: { 200 } in thousands (positive integer) : Sample interval: { 100 } (positive integer) : Echo interval: { 1 } in thousands (positive integer) : DATA SPECIFICATIONS : File name:{dpvax07 } (named file must be of type DAT) : Read Format: { } : (blank for default; with parentheses for format) : Observations: { 25 } (rows, non-negative integer) : Variables: { 4 } (columns, non-negative integer) : PARAMETERS : number: { 27} (positive integer) : NAME PARAMETERS (lines may be inserted or deleted in this block) : 1:{ N01 } : 2:{ N02 } : 3:{ N03 } : 4:{ N04 } : 5:{ N05 } : 6:{ N06 } : 7:{ N07 } : 8:{ N08 } : 9:{ N09 } : 10:{ N10 } : 11:{ N11 } : 12:{ N12 } : 13:{ N13 } : 14:{ N14 } : 15:{ N15 } : 16:{ N16 } : 17:{ N17 } : 18:{ N18 } : 19:{ N19 } : 20:{ N20 } : 21:{ N21 } : 22:{ N22 } : 23:{ N23 } : 24:{ N24 } : 25:{ N25 } : 26:{ MEAN R } : 27:{ STD R } : INITIAL VALUE, PERTURBATION STD, HISTOGRAM and CORRELATION MATRIX CONTROL : (bins integer, other numbers floating point, check for marginal and corrln) : (lines may be inserted or deleted in this block) : |Abreviated| Starting | Standard |Hstgm| Lower | Upper |Prn|Crl: | name | value | Deviation | bins| limit | limit |mrg|mtx: 1:|{ N01 }|{1.075E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 2:|{ N02 }|{1.116E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 3:|{ N03 }|{1.098E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 4:|{ N04 }|{1.052E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 5:|{ N05 }|{1.028E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 6:|{ N06 }|{1.051E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 7:|{ N07 }|{1.054E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 8:|{ N08 }|{1.039E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 9:|{ N09 }|{1.024E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 10:|{ N10 }|{1.055E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 11:|{ N11 }|{1.054E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 12:|{ N12 }|{1.070E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 13:|{ N13 }|{1.044E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 14:|{ N14 }|{1.095E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 15:|{ N15 }|{1.093E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 16:|{ N16 }|{1.134E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 17:|{ N17 }|{1.153E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 18:|{ N18 }|{1.169E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 19:|{ N19 }|{1.165E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 20:|{ N20 }|{1.156E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 21:|{ N21 }|{1.190E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 22:|{ N22 }|{1.187E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 23:|{ N23 }|{1.168E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 24:|{ N24 }|{1.146E+02}|{5.000E+00}|{ }|{ }|{ }|{ }|{ }: 25:|{ N25 }|{1.255E+02}|{5.000E+00}|{100}|{ 15 .0 }|{ 200.0 }|{X}|{X}: 26:|{ MEAN R }|{6.442E-03}|{2.000E-02}|{100}|{ -0.02 }|{ 0.04 }|{X}|{X}: 27:|{ STD R }|{2.860E-02}|{1.000E-02}|{100}|{ 0.0 }|{ 0.06 }|{X}|{X}: TRIPLES OF PARAMETERS SELECTED FOR 3-DIMENSIONAL JOINT POSTERIOR HISTOGRAMS : Parameter id. numbers Print table : (integer) (check) : 3-d histogram #1 { }{ }{ } { } : 3-d histogram #2 { }{ }{ } { } : PAIRS OF PARAMETERS SELECTED FOR 2-DIMENSIONAL JOINT POSTERIOR HISTOGRAMS : 2-d Parameter Prn | 2-d Parameter Prn | 2-d Parameter Prn | : hst id. nos. tbl | hst id. nos. tbl | hst id. nos. tbl | : # 1 { }{ } { } | # 2 { }{ } { } | # 3 { }{ } { } | : # 4 { }{ } { } | # 5 { }{ } { } | # 6 { }{ } { } | : # 7 { }{ } { } | # 8 { }{ } { } | # 9 { }{ } { } | : # 10 { }{ } { } | # 11 { }{ } { } | # 12 { }{ } { } | : # 13 { }{ } { } | # 14 { }{ } { } | # 15 { }{ } { } | : # 16 { }{ } { } | # 17 { }{ } { } | # 18 { }{ } { } | : PARAMETERS TO WRITE TO POSTERIOR SAMPLE FILE : Number selected: { 3 } (non-negative integer; zero to suppress) : (lines may be inserted or deleted in this block) : (select by parameter id. no., blank for all in order up to number selected): { 25}{ 26}{ 27}{ }{ }{ }{ }{ }{ }{ }{ }{ }{ }{ }{ }: JOB SPECIFIC FIXED VALUES : Number specified: { 4 } (non-negative integer) : Value (floating point) Name (lines may be inserted or deleted here) : 1:{ 0.0 }{ mean for normal prior on mean r }: 2:{ 0.1 }{ std for normal prior on mean r }: 3:{ 0.1 }{ mean for normal prior on std of r (ignoring truncation) }: 4:{ 0.1 }{ std for normal prior on std of r (ignoring truncation) }: end of file